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South Koreans Develop High-Performance Software Router.
HPC Wire, covering news on computing software, hardware, networking, storage, tools and applications, published an article on the development of high-performance router by a KAIST research team.
The research team consisted of the Departments of Computer Science and Electrical Engineering, KAIST, presented PacketShader, a high-performance software router framework for general packet processing with Graphics Processing Unit (GPU) acceleration. PacketShader, the research team said, that exploits the massively-parallel processing power of GPU to address the CPU bottleneck in current software routers.
For the article, please click the link: http://www.hpcwire.com/news/South-Koreans-Develop-High-Performance-Software-Router-101401434.html
2010.08.25 View 11519 -
An internationally renowned academic journal published the research result produced by a KAST research team on its cover.
Fc DAAP VEGF-Trap
Photograph showing the gross features of tumor growth along the mesentery-intestinal border. T: tumor. Scale bars represent 5 mm.
Professor Gou-Young Koh of the Biological Sciences Department, KAIST, and his research team published their research result in Cancer Cell, a peer-review scientific journal, as a cover article dated August 17, 2010. It is the first time for the journal to pick up a paper written by a Korean research team and publish it as the cover.
It has been known that a vascular growth factor (VEGF) is closely related to the growth of a tumor. The research team recently discovered that in addition to VEGF, another growth factor, angiopoietin-2 (Ang2), is also engaged with the increase of tumors.
Professor Koh said, “VEGF and the angiopoietins play critical roles in tumor progression and metastasis, and a single inhibitor targeting both factors have not been available.”
The team led by Professor Koh has developed a double anti-angiogenic protein (DAAP) that can simultaneously bind VEGF-A and the angiopoietins and block their actions.
Professor Koh said in his paper, “DAAP is a highly effective molecule for regressing tumor angiogenesis and metastasis in implanted and spontaneous solid tumor; it can also effectively reduce ascites formation and vascular leakage in an ovarian carcinoma model. Thus, simultaneous blockade of VEGF-A and angiopoietins with DAAP is an effective therapeutic strategy for blocking tumor angiogenesis, metastasis, and vascular leakage.”
So far, cancer patients have received Avastin, anticancer drug, to inhibit VEGF, but the drug has not successfully restrained the growth of cancer tumors and brought to some of the patients with serious side effects instead.
Professor Koh said, “DAAP will be very effective to control the expansion of tumor growth factors, which will open up a new possibility for the development of more helpful cancer medicine with low side effects.”
2010.08.20 View 13158 -
Nature Photonics, a peer-reviewed scientific journal, released a paper written by a KAIST research team on the time-of-flight measurement.
Professor Seung-Woo Kim of the Mechanical Engineering Department, KAIST, and his research team published the result of their study on the measurement of 1 nanometer (nm) precision.
“The time-of-flight of light pulses has long been used as a direct measure of distance, but state-of-the-art measurement precision using conventional light pulses or microwaves peaks at only several hundreds of micrometers. Here, we improve the time-of-flight precision to the nanometer regime by timing femtosecond pulses through phase-locking control of the pulse repetition rate using the optical cross-correlation technique,” Professor Kim said.
According to the experiment conducted by the research team, “An Allan deviation of 117 nm in measuring a 700m distance in air at a sampling rate of 5 millisecond (ms) once the pulse repetition is phased-locked, which reduces to 7 nm as the averaging time increases to 1 second (s).”
When measuring an object located in a far distance, a laser beam is projected to the object, and the reflected light is analyzed; the light is then converted into an electric signal to calculate the distance. In so doing, Professor Kim said, the conventional method of measurement creates at least 1 mm of deviation.
He argues, “This enhanced capability is maintained at long range without periodic ambiguity, and is well suited to lidar applications. This method could also be applied to future space missions involving formation-flying satellites for synthetic aperture imaging and remote experiments related to general relativity theory."
Nature Photonics published the article online on August 8, 2010.
2010.08.18 View 13080 -
KAIST has developed a powerless and wireless keyboard that can be folded and easily carried around.
The KAIST Institute for Information Technology Convergence (KIITC) has developed the next generation keyboard that does not need power and wires.
The powerless/wireless keyboard developed by KIITC is flexible, foldable, portable, and compact, making the possession of keyboard easier and more convenient.
The idea of this technology was derived from "Idea Contest for Future Device" opened by KIITC in 2007, and Future Device Team (Team Leader: Dr. Sungkwan Jung) of KIITC embodied the idea and developed full-flexible powerless/wireless keyboard by using the passive Radio Frequency Identification (RFID) technology to support the convenient data input for daily mobile life.
Through the technology, KAIST expects to realize ubiquitous computing and communication environment, open a new market for foldable keyboards, and secure the competitiveness of mobile devices industries in the world market.
KIITC has also successfully transferred the technology of powerless/wireless keyboard to Hanyang Demitech for commercialization.
2010.08.12 View 13381 -
A graduate-level education for working professionals in science programs and exhibitions will be available from mid-August this year.
The Graduate School of Culture Technology (GSCT), KAIST, has created a new course for professionals who purse their career in science programs and exhibitions, which will start on August 19 and continue through the end of November 2010. The course will be held at Digital Media City in Seoul.
The course, also co-sponsored by National Science Museum, will offer students tuition-free opportunities to brush up their knowledge on the administration, policy, culture, technology, planning, contents development, and technology & design development, of science programs and exhibitions. Such subjects as science contents, interaction exhibitions, and utilization of new media will be studied and discussed during the course. Students will also have a class that is interactive, engaging, and visual, as well as provides hands-on learning activities.
A total of 30 candidates will be chosen for the course. Eligible applicants are graduates with a B.S. degree in the relevant filed, science program designers and exhibitors, curators for science and engineering museums, and policy planners for public and private science development programs.
2010.08.12 View 12985
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Bioengineers develop a new strategy for accurate prediction of cellular metabolic fluxes
A team of pioneering South Korean scientists has developed a new strategy for accurately predicting cellular metabolic fluxes under various genotypic and environmental conditions. This groundbreaking research is published in the journal Proceedings of the National Academy of Sciences of the USA (PNAS) on August 2, 2010.
To understand cellular metabolism and predict its metabolic capability at systems-level, systems biological analysis by modeling and simulation of metabolic network plays an important role. The team from the Korea Advanced Institute of Science and Technology (KAIST), led by Distinguished Professor Sang Yup Lee, focused their research on the development of a new strategy for more accurate prediction of cellular metabolism.
“For strain improvement, biologists have made every effort to understand the global picture of biological systems and investigate the changes of all metabolic fluxes of the system under changing genotypic and environmental conditions,” said Lee. The accumulation of omics data, including genome, transcriptome, proteome, metabolome, and fluxome, provides an opportunity to understand the cellular physiology and metabolic characteristics at systems-level. With the availability of the fully annotated genome sequence, the genome-scale in silico (means “performed on computer or via computer simulation.”) metabolic models for a number of organisms have been successfully developed to improve our understanding on these biological systems. With these advances, the development of new simulation methods to analyze and integrate systematically large amounts of biological data and predict cellular metabolic capability for systems biological analysis is important.
Information used to reconstruct the genome-scale in silico cell is not yet complete, which can make the simulation results different from the physiological performances of the real cell. Thus, additional information and procedures, such as providing additional constraints (constraint: a term to exclude incorrect metabolic fluxes by restricting the solution space of in silico cell) to the model, are often incorporated to improve the accuracy of the in silico cell.
By employing information generated from the genome sequence and annotation, the KAIST team developed a new set of constraints, called Grouping Reaction (GR) constraints, to accurately predict metabolic fluxes. Based on the genomic information, functionally related reactions were organized into different groups. These groups were considered for the generation of GR constraints, as condition- and objective function- independent constraints. Since the method developed in this study does not require complex information but only the genome sequence and annotation, this strategy can be applied to any organism with a completely annotated genome sequence.
“As we become increasingly concerned with environmental problems and the limits of fossil resources, bio-based production of chemicals from renewable biomass has been receiving great attention. Systems biological analysis by modeling and simulation of biological systems, to understand cellular metabolism and identify the targets for the strain improvement, has provided a new paradigm for developing successful bioprocesses,” concluded Lee. This new strategy for predicting cellular metabolism is expected to contribute to more accurate determination of cellular metabolic characteristics, and consequently to the development of metabolic engineering strategies for the efficient production of important industrial products and identification of new drug targets in pathogens.”
2010.08.05 View 15012 -
Native-like Spider Silk Produced in Metabolically Engineered Bacterium
Microscopic picture of 285 kilodalton recombinant spider silk fiber
Researchers have long envied spiders’ ability to manufacture silk that is light-weighted while as strong and tough as steel or Kevlar. Indeed, finer than human hair, five times stronger by weight than steel, and three times tougher than the top quality man-made fiber Kevlar, spider dragline silk is an ideal material for numerous applications. Suggested industrial applications have ranged from parachute cords and protective clothing to composite materials in aircrafts. Also, many biomedical applications are envisioned due to its biocompatibility and biodegradability.
Unfortunately, natural dragline silk cannot be conveniently obtained by farming spiders because they are highly territorial and aggressive. To develop a more sustainable process, can scientists mass-produce artificial silk while maintaining the amazing properties of native silk? That is something Sang Yup Lee at the Korea Advanced Institute of Science and Technology (KAIST) in Daejeon, the Republic of Korea, and his collaborators, Professor Young Hwan Park at Seoul National University and Professor David Kaplan at Tufts University, wanted to figure out. Their method is very similar to what spiders essentially do: first, expression of recombinant silk proteins; second, making the soluble silk proteins into water-insoluble fibers through spinning.
For the successful expression of high molecular weight spider silk protein, Professor Lee and his colleagues pieced together the silk gene from chemically synthesized oligonucleotides, and then inserted it into the expression host (in this case, an industrially safe bacterium Escherichia coli which is normally found in our gut). Initially, the bacterium refused to the challenging task of producing high molecular weight spider silk protein due to the unique characteristics of the protein, such as extremely large size, repetitive nature of the protein structure, and biased abundance of a particular amino acid glycine. “To make E. coli synthesize this ultra high molecular weight (as big as 285 kilodalton) spider silk protein having highly repetitive amino acid sequence, we helped E. coli overcome the difficulties by systems metabolic engineering,” says Sang Yup Lee, Distinguished Professor of KAIST, who led this project. His team boosted the pool of glycyl-tRNA, the major building block of spider silk protein synthesis. “We could obtain appreciable expression of the 285 kilodalton spider silk protein, which is the largest recombinant silk protein ever produced in E. coli. That was really incredible.” says Dr. Xia.
But this was only step one. The KAIST team performed high-cell-density cultures for mass production of the recombinant spider silk protein. Then, the team developed a simple, easy to scale-up purification process for the recombinant spider silk protein. The purified spider silk protein could be spun into beautiful silk fiber. To study the mechanical properties of the artificial spider silk, the researchers determined tenacity, elongation, and Young’s modulus, the three critical mechanical parameters that represent a fiber’s strength, extensibility, and stiffness. Importantly, the artificial fiber displayed the tenacity, elongation, and Young’s modulus of 508 MPa, 15%, and 21 GPa, respectively, which are comparable to those of the native spider silk.
“We have offered an overall platform for mass production of native-like spider dragline silk. This platform would enable us to have broader industrial and biomedical applications for spider silk. Moreover, many other silk-like biomaterials such as elastin, collagen, byssus, resilin, and other repetitive proteins have similar features to spider silk protein. Thus, our platform should also be useful for their efficient bio-based production and applications,” concludes Professor Lee.
This work is published on July 26 in the Proceedings of the National Academy of Sciences (PNAS) online.
2010.07.28 View 19353 -
Professor Thompson
Professor Mary Kathryn Thompson of Civil and Environmental Engineering Department wrote her regular column on correlation between art and engineering, “Engineers, Artists Not on Opposite Ends.” The column was published by the Korea Herald on July 23, 2010. For reading, please click the link below.
http://www.koreaherald.com/opinion/Detail.jsp?newsMLId=20100722000548
2010.07.23 View 10970 -
The thermal fluctuation and elasticity of cell membranes, lipid vesicles, interacting with pore-forming peptides were reported by a research team at KAIST.
A research team from KAIST, consisted of Sung-Min Choi, Professor of Nuclear and Quantum Engineering Department, and Ji-Hwan Lee, a doctoral student in the Department, published a paper on the “thermal fluctuation and elasticity of lipid vesicles interacting with pore-forming peptides.” The paper was carried by Physical Review Letters, an internationally renowned peer-review journal on physics on July 16, 2010.
Cell membranes, which consist of lipid bilayers, play important roles in cells as barriers to maintain concentrations and matrices to host membrane proteins. During cellular processes such as cell fission and fusion, the cell membranes undergo various morphological changes governed by the interplay between protein and lipid membranes. There have been many theoretical and experimental approaches to understand cellular processes driven by protein-lipid membrane interactions. However, it is not fully established how the membrane elastic properties, which play an important role in membrane deformation, are affected by the protein-membrane interactions.
Antimicrobial peptides are one of the most common examples of proteins that modify membrane morphology. While the pore-forming mechanisms of antimicrobial peptides in lipid bilayers have been widely investigated, there have been only a few attempts to understand the mechanisms in terms of membrane elastic properties. In particular, the effects of pore formation on the membrane fluctuation and elastic properties, which provide key information to understand the mechanism of antimicrobial peptide activity, have not been reported yet. The research team reports the thermal fluctuation and elasticity of lipid vesicles interacting with pore-forming peptides, which were measured by neutron spin-echo spectroscopy.
The results of this study are expected to pay an important role in understanding the elastic behavior and morphological changes of cell membranes induced by protein-membrane interactions, and may provide new insights for developing new theoretical models for membrane fluctuations which include the membrane mediated interaction between protein patches.
(a) (b)
Figure
(a) Schematics for bound melittin and pores in lipid bilayers
(b) P NMR signal ratio (with/without Mn2+) of DOPC LUV-melittin vs P/L at 30˚C. The dashed line is a guide for eyes.
2010.07.23 View 13107 -
A new facility at KAIST opened on July 6, 2010.
Ryu Geun-Chul Sports Complelx will allow students, faculty and staff to pause a moment and exhale in the hustle and bustle of their daily lives.
An opening ceremony celebrating the completion of a new facility for the KAIST family was held on July 6, 2010 at the campus. Had it not been for contributions of many people and organizations throughout the nation, among others, Dr. Geun-Chul Ryu, POSCO, Woori Bank, members of KAIST community, parents, and other citizens, it would be impossible to build the facility, said the university.
The Complex, a three-story building with a basement, has an indoor court for basketball and volleyball with 3,000 individual seats, 200 meters of running track, indoor golf range, a fitness center, and other convenient facilities.
Any members of KAIST community can visit the building and relax their body and mind stressed with work and study. It also provides a large space for ceremonial and cultural gatherings such as 2010 KAIST commencement ceremony.
The official name of the building is “Ryu Geun-Chul Sports Complelx,” which was created in appreciation of Dr. Geun-Chul Ryu’s generous act who had donated 57.8 billion won worth of real estate to KAIST in August 2008.
2010.07.07 View 13816 -
President of Israel visited KAIST on June 9, 2010.
President of Israel, Shimon Peres, visited KAIST today on June 9, 2010 to witness the development of science and technology in Korea and explore ways of establishing collaboration and cooperation with industries and universities between Korea and Israel. President Peres led a delegation consisted of the Israeli Mister of Industry, Trade, and Labor, the Minister of Communication, and 60 business leaders from the top companies in the security, infrastructure, communication, high-tech, and water industries.
Upon their arrival to the campus, the Israeli delegation was greeted by KAIST’s humanoid robot, “HUBO,” and then moved to its branch campus, IT Convergence Campus, for a ride of Online Electric Vehicle (OLEV) that has been developed by KAIST. The OLEV receives the necessary power through the cable lines buried underground, so it can be provided with a constant and continuous supply of electricity while running or stopping.
Between roads and OLEVs is nothing but space. There is no electrical wires intricately crossed underbody of the electric car or above the road. The pick-up equipment installed beneath the body of the electric car collects magnetic fields created around the underground cables, which then converts the filed into electricity. The OLEV’s wireless, non-contact charging system made it possible for a battery currently used for hybrid or pure electric cars on the market to be smaller and cheaper.
President Peres expressed a great interest in the technology applied to the OLVE, quoting, “the OLEV system is indeed very impressive.” He talked about efforts being made in Israel with respect to the development of electric cars. The country plans to replace the conventional transportation system with electric cars by constructing a network of battery exchange stations and roadside charge points which allow the cars to be charged whenever they are parked.
“Despite the different approach taken by the two nations for the development of electric cars, I believe that transforming the automobile industry from combustion engine to electric system is the right direction we should all follow. Without addressing the current transportation system that heavily dependent on natural resources, we will not be able to promote “green growth on a global scale,” added President Peres.
In addition to electric cars, President Peres took up a considerable portion of his time to exchange ideas on how to expand cooperative relations between universities in Korea and Israel, specifically in the area of space, biotechnology, nanotechnology, high-tech, renewable and alternative energy, and the EEWS initiatives that have been implemented by KAIST to find answers to global issues such as climate change and depletion of natural resources. The EEWS stands for energy, environment, water, and sustainability.
In response, the president of KAIST pledged to set up a stronger and greater tie with research universities in Israel, particularly called for more collaboration between KAIST and Technion-Israel Institute of Technology.
Also, the Israeli delegation had a tour for several Korean research and development centers in Daedeok Innopolis, located in the City of Daejeon, which is the 2nd largest science and research complex in Korea.
Shimon Peres, the 9th president of Israel, held many of important government positions in Israel, among other things, Prime Minster and Minister of Defense. He won Nobel Peace Prize in 1994, together with Yitzhak Rabin and Yasser Arafat for the conclusion of a peace agreement, Oslo Accords, between Israel and Palestine Liberation Organization.
2010.06.09 View 17900
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"The 2010 Artificial Intelligence Robot War Competition" begins to receive applications
[Event Notice]
“The 2010 Artificial Intelligence Robot War Competition” begins to receive applications
A good opportunity to gauge the intelligence of your robots
“The 2010 Artificial Intelligence (AI) Robot War Competition” will be held in October 2010, and the Competition has been receiving applications from contestants since April 1st. The deadline for the application will be May 31st, 2010.
Qualified contestants must be a minimum of two, but less than six, team members, and they will compete in one of the two fields: System on Chip (SoC) Taekwon Robot and Humanoid Robot (HURO). Winners will be decided based on the intelligence capabilities presented by a robot’s platform that mimics key functions of the human brain.
SoC Taekwon Robot will compete against one another by using a camera installed on its head to recognize visual images, locations, distances, and gestures of the other competing robot.
HURO competition is a new entry begun this year, and winners will be determined in accordance with the robot’s ability to perform given missions and fights. Missions are to go through a track installed with obstacles, recognize colors and shapes of barriers, and knock down barriers to earn scores. Fighting will be performed in the form of a Korean martial art, Tae-kwon-do.
The Korean government has nominated Robotics as one of the key growth engines to develop IT industry and Korean economy. Robotics converge many of different engineering fields, such as machinery, materials, components, and embedded software. In particular, the SoC is an essential technology for Korea to continuously take lead in the semi-conductor industry in the world, which is an important element for robotics.
SoC stands for System on Chip, an integrated chip that assembles various chips and components to be fabricated together on a single chip, instead of building them on a circuit board. The SoC technology has advantages of higher performance, smaller space requirements, lower memory requirements, higher system reliability, and lower consumer costs.
An artificial intelligence SoC robot is autonomous because it can adapt itself to changes in various environments and reach a given goal without constantly receiving external orders.
For details of the event, please refer to the website of www.socrobotwar.org.
2010.04.06 View 14020